gnuplot_single_3.cpp File Reference

#include <iostream>
#include <iomanip>
#include <fstream>
#include <cmath>
#include "GlobalVariables.h"
#include "GnuplotGlobal.h"
#include "sssr.h"
#include "E_Coli.h"
#include "ParameterEstimation_E_Coli.h"
#include "EO_rExp_tExp.h"
#include "CV_rIG_tExp.h"
#include "CV_rExp_tExp.h"
#include "Molecular_rExp_tExp.h"
#include "Funz_C.h"
#include "setSizesTitles.hpp"

Macros
#define	max(a, b)   ( ((a) > (b)) ? (a) : (b) )
#define	min(a, b)   ( ((a) < (b)) ? (a) : (b) )

Functions
void	lunch_gnuplot (string name_file_gnu)
void	gnuplot_run (string names[], string nome_info, double mean, int tipo_run, int save_, int cont_sim)
void	Name_jumps (std::string name_file_read, std::string names[], int delete_)
double	Analysis_run (string name_file_read, string names[], int run)
string	setNameScriptgnuplotSingleGeneral (string tipo, int con_gen_sim, int save_)
string	setNameSCRIPTlunchGnuplotSingleGeneral (string tipo, int con_gen_sim, int save_)

Macro Definition Documentation

#define max	(		a,
			b
	)		( ((a) > (b)) ? (a) : (b) )

#define min	(		a,
			b
	)		( ((a) < (b)) ? (a) : (b) )

Function Documentation

double Analysis_run	(	string	name_file_read,
		string	names[],
		int	run
	)

This function analysis the runs and tumbles: the function save temporaly the data in file r_u.txt etc. (see line 73) divide up/down gradient and prepare lateX file for analysis run/tumble

Parameters

run==1	run, else analysis tumbles
name_file_read	name where run/tumble are saved.

void gnuplot_run	(	string	names[],
		string	nome_info,
		double	mean,
		int	tipo_run,
		int	save_,
		int	cont_sim
	)

function to plot the run or tumbles

void lunch_gnuplot

(

string

name_file_gnu

)

This function lunch the script name_file_gnu via gnuplot It is not used everytime since it has been written not at the beginning of the devopment of the softwer. You might want to substitute other command with this function

Parameters

name_file_gnu

name of script to pass to gnuplot

void Name_jumps	(	std::string	name_file_read,
		std::string	names[],
		int	delete_
	)

This function set the names for the file with data on run/tumble. It takes a basic name and up the suffix with the indication of the type (up/down etc. gradient) if delete ==0 we delete the files with these names

string setNameScriptgnuplotSingleGeneral	(	string	tipo,
		int	con_gen_sim,
		int	save_
	)

set name for the general plot 1 baccterium - script

string setNameSCRIPTlunchGnuplotSingleGeneral	(	string	tipo,
		int	con_gen_sim,
		int	save_
	)

set name for the SCRIPT to lunch general plot 1 baccterium - script