EcoliSimulator
2.0.1a
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This is the complete list of members for ParameterEstimation_CV_rIG_tExp, including all inherited members.
A_0 | CV_rExp_tExp | protected |
A_1 | CV_rExp_tExp | protected |
A_2 | CV_rExp_tExp | protected |
A_3 | CV_rExp_tExp | protected |
agg_dyint(double dt, double t) | CV_rExp_tExp | virtual |
agg_dyn(double dt, double t) | CV_rIG_tExp | virtual |
agg_ligand(double t, Funz_C *f) | E_coli | |
aggiornamento(double dt, double t, Funz_C *f, int &sign_p, ofstream *file_tau, std::ofstream &file_theta) | E_coli | |
B_0 | CV_rIG_tExp | protected |
B_1 | CV_rIG_tExp | protected |
B_2 | CV_rIG_tExp | protected |
barriera_r | E_coli | protected |
barriera_t | E_coli | protected |
beta_2 | CV_rExp_tExp | protected |
beta_3 | CV_rExp_tExp | protected |
C() | E_coli | |
c | E_coli | protected |
C_iniziale() | E_coli | |
c_iniziale | E_coli | protected |
change_lambda_par() | CV_rExp_tExp | |
change_par(int change) | CV_rIG_tExp | virtual |
change_sigma_par() | CV_rIG_tExp | |
codice_batterio | E_coli | |
CV_rExp_tExp() | CV_rExp_tExp | |
CV_rExp_tExp(const CV_rExp_tExp &modello) | CV_rExp_tExp | |
CV_rIG_tExp() | CV_rIG_tExp | |
CV_rIG_tExp(const CV_rIG_tExp &modello) | CV_rIG_tExp | |
D_theta | E_coli | protected |
debugFunction() | CV_rIG_tExp | virtual |
deltaW_ec(double dt) | E_coli | protected |
dist_iniz_ec(std::array< double, 2 > x0, double R, unsigned int num_dist) | E_coli | |
distribution_I_r | ParameterEstimation_E_coli | protected |
distribution_I_t | ParameterEstimation_E_coli | protected |
E_coli() | E_coli | |
E_coli(const E_coli &modello) | E_coli | |
engine_altro | E_coli | |
engine_barrier | E_coli | |
engine_theta | E_coli | |
Exp_dist_ec() | E_coli | protected |
f_lambda() | ParameterEstimation_CV_rIG_tExp | virtual |
F_RC_0() | E_coli | |
F_RC_1() | E_coli | |
F_RC_q() | E_coli | |
f_sigma() | ParameterEstimation_CV_rIG_tExp | virtual |
F_tipo_response_c() | E_coli | |
gamma_par_double_ec() | E_coli | protected |
Get_RC_0(double Rc0) | E_coli | |
Get_RC_1(double Rc1) | E_coli | |
Get_RC_q(int Rcq) | E_coli | |
Get_tipo_response_c(int T_r) | E_coli | |
gnuplot_response(std::string names_info_mod, int save_, int con_gen_sim) | E_coli | virtual |
gnuplot_single(std::string *names_files_Ecoli_mod, std::string &names_indice_mod, std::string *names_files_tau_mod, std::string &names_file_dyn_mod, std::string *names_info_mod, double T_f, Funz_C *f, int save_, int con_gen_sim) | CV_rExp_tExp | virtual |
gnuplot_single_film(std::string *names_files_Ecoli_mod, std::string &names_indice_mod, std::string *names_files_tau_mod, std::string &names_file_dyn_mod, std::string *names_info_mod, double T_f, Funz_C *f, int cont_sim) | E_coli | virtual |
gnuplot_single_film_gif(std::string *names_files_Ecoli_mod, std::string &names_indice_mod, std::string *names_files_tau_mod, std::string &names_file_dyn_mod, std::string *names_info_mod, double T_f, Funz_C *f, int cont_sim) | E_coli | virtual |
gnuplotFunzInternalDynalmic(std::string buffer, int save_, int con_gen_sim) | E_coli | virtual |
GoodFit | ParameterEstimation_E_coli | protected |
I_tau_r | ParameterEstimation_E_coli | protected |
I_tau_t | ParameterEstimation_E_coli | protected |
initial_position_ec(int j, std::array< double, 2 > x0, double Raggio, int num_dist, int &cont_dist_5, int delta_dist_cont, double Delta_delta_dist) | E_coli | |
KS_D_n | ParameterEstimation_E_coli | protected |
KS_L1 | ParameterEstimation_E_coli | protected |
lambda_r | E_coli | protected |
lambda_t | E_coli | protected |
m | CV_rExp_tExp | protected |
N_dyn_var() | E_coli | |
n_dyn_var | E_coli | protected |
newtheta_ec(double theta) | E_coli | protected |
nu_ | CV_rExp_tExp | protected |
ParameterEstimation_CV_rIG_tExp() | ParameterEstimation_CV_rIG_tExp | |
ParameterEstimation_CV_rIG_tExp(const ParameterEstimation_CV_rIG_tExp &modello) | ParameterEstimation_CV_rIG_tExp | |
ParameterEstimation_E_coli() | ParameterEstimation_E_coli | |
ParameterEstimation_E_coli(const E_coli &modello) | ParameterEstimation_E_coli | |
print_info(std::ofstream &file_save) | CV_rIG_tExp | virtual |
produce(Funz_C *f_i, double dt) | E_coli | virtual |
production_rate | E_coli | protected |
Production_rate() | E_coli | |
Q | CV_rExp_tExp | protected |
rand_normal_ec(double stddev) | E_coli | protected |
RC_0 | E_coli | protected |
RC_1 | E_coli | protected |
RC_q | E_coli | protected |
reset_barrier() | CV_rIG_tExp | virtual |
reset_barrier_t() | E_coli | virtual |
reset_par() | CV_rIG_tExp | virtual |
response_function() | E_coli | |
s_F_lambda_r(vector< Q_tau_stat > vector_lambda, int n_vect) | ParameterEstimation_CV_rIG_tExp | |
E_coli::s_F_lambda_r(std::vector< Q_tau_stat > vector_lambda, int n_vect) | E_coli | virtual |
s_lambda_r | E_coli | |
s_lambda_t | ParameterEstimation_E_coli | protected |
salto_ | E_coli | protected |
save_dyn(std::ofstream &file_, double t) | CV_rExp_tExp | |
ParameterEstimation_E_coli::save_dyn(ofstream &file, double t) | E_coli | virtual |
save_E_coli(ofstream *file, double t) | E_coli | |
save_E_coli_initial(std::ofstream *file_, double t) | E_coli | |
save_run(double t, ofstream &file_salto, double dt) | E_coli | |
save_theta(double t, double theta, std::ofstream &file_run) | E_coli | |
save_tumble(double t, ofstream &file_tumble, double dt) | E_coli | |
saveIntDyn(string nameFile) | ParameterEstimation_CV_rIG_tExp | |
CV_rIG_tExp::saveIntDyn(std::string nameFile) | CV_rIG_tExp | virtual |
seed_ecoli | E_coli | protected |
set_GoodnessFit(int Good, double D_n, double cumD_n) | ParameterEstimation_E_coli | virtual |
set_response(int ftipo_response_c, double fRC_0, double fRC_1, int fRC_q) | E_coli | |
setEngine_ec(std::mt19937_64 *engine_thread_theta, std::mt19937_64 *engine_thread_bar, std::mt19937_64 *engine_thread_altro) | E_coli | protected |
setProductionRate(double _prodRate) | E_coli | |
setSeed_ec(unsigned int *seed_thread) | E_coli | protected |
sign_c | E_coli | protected |
simulation | E_coli | |
start_simulation(Funz_C *f) | E_coli | |
statF_lambda_r(s_lambda &vector_lambda) | E_coli | |
stationary_dyn(double dt, std::vector< double > &m0, int changed_pos) | CV_rExp_tExp | virtual |
t_r | E_coli | protected |
t_t | E_coli | protected |
tau_r | E_coli | protected |
Tau_t(double tt_) | E_coli | |
tau_t | E_coli | protected |
theta | E_coli | protected |
Tipo_batterio | E_coli | |
tipo_lambda | CV_rExp_tExp | protected |
tipo_response_c | E_coli | protected |
tipo_sigma | CV_rIG_tExp | protected |
tipoNewTheta | E_coli | protected |
unifRand_ec() | E_coli | protected |
up_down | E_coli | protected |
v | E_coli | protected |
V() | E_coli | inline |
writeScriptgnuplotSingle(std::string tipo, std::string *names_files_Ecoli_mod, std::string *names_files_tau_mod, std::string *names_info_mod, std::string &names_file_dyn_mod, double T_f, int con_gen_sim, int save_) | CV_rExp_tExp | protectedvirtual |
writeScriptLunchgnuplotSingle(std::string tipo, int save_, int con_gen_sim) | E_coli | protectedvirtual |
X() | E_coli | |
x | E_coli | protected |