EcoliSimulator  2.0.1a
EO_rExp_tExp Member List

This is the complete list of members for EO_rExp_tExp, including all inherited members.

A_0EO_rExp_tExpprotected
A_1EO_rExp_tExpprotected
A_2EO_rExp_tExpprotected
A_3EO_rExp_tExpprotected
agg_dyint(double dt, double t)EO_rExp_tExpvirtual
agg_dyn(double dt, double t)EO_rExp_tExpvirtual
agg_ligand(double t, Funz_C *f)E_coli
aggiornamento(double dt, double t, Funz_C *f, int &sign_p, ofstream *file_tau, std::ofstream &file_theta)E_coli
barriera_rE_coliprotected
barriera_tE_coliprotected
cE_coliprotected
C()E_coli
C_iniziale()E_coli
c_inizialeE_coliprotected
change_lambda_par()EO_rExp_tExp
change_par(int change)EO_rExp_tExpvirtual
codice_batterioE_coli
D_thetaE_coliprotected
debugFunction()E_colivirtual
deltaW_ec(double dt)E_coliprotected
dist_iniz_ec(std::array< double, 2 > x0, double R, unsigned int num_dist)E_coli
distribution_I_rParameterEstimation_E_coliprotected
distribution_I_tParameterEstimation_E_coliprotected
E_coli()E_coli
E_coli(const E_coli &modello)E_coli
engine_altroE_coli
engine_barrierE_coli
engine_thetaE_coli
EO_rExp_tExp()EO_rExp_tExp
EO_rExp_tExp(const EO_rExp_tExp &modello)EO_rExp_tExp
Exp_dist_ec()E_coliprotected
f_lambda()EO_rExp_tExpvirtual
F_RC_0()E_coli
F_RC_1()E_coli
F_RC_q()E_coli
F_tipo_response_c()E_coli
gamma_par_double_ec()E_coliprotected
Get_RC_0(double Rc0)E_coli
Get_RC_1(double Rc1)E_coli
Get_RC_q(int Rcq)E_coli
Get_tipo_response_c(int T_r)E_coli
gnuplot_response(std::string names_info_mod, int save_, int con_gen_sim)E_colivirtual
gnuplot_single(std::string *names_files_Ecoli_mod, std::string &names_indice_mod, std::string *names_files_tau_mod, std::string &names_file_dyn_mod, std::string *names_info_mod, double T_f, Funz_C *f, int save_, int con_gen_sim)EO_rExp_tExpvirtual
gnuplot_single_film(std::string *names_files_Ecoli_mod, std::string &names_indice_mod, std::string *names_files_tau_mod, std::string &names_file_dyn_mod, std::string *names_info_mod, double T_f, Funz_C *f, int cont_sim)E_colivirtual
gnuplot_single_film_gif(std::string *names_files_Ecoli_mod, std::string &names_indice_mod, std::string *names_files_tau_mod, std::string &names_file_dyn_mod, std::string *names_info_mod, double T_f, Funz_C *f, int cont_sim)E_colivirtual
gnuplotFunzInternalDynalmic(std::string buffer, int save_, int con_gen_sim)E_colivirtual
GoodFitParameterEstimation_E_coliprotected
I_tau_rParameterEstimation_E_coliprotected
I_tau_tParameterEstimation_E_coliprotected
initial_position_ec(int j, std::array< double, 2 > x0, double Raggio, int num_dist, int &cont_dist_5, int delta_dist_cont, double Delta_delta_dist)E_coli
KS_D_nParameterEstimation_E_coliprotected
KS_L1ParameterEstimation_E_coliprotected
lambda_rE_coliprotected
lambda_tE_coliprotected
mEO_rExp_tExpprotected
N_dyn_var()E_coli
n_dyn_varE_coliprotected
newtheta_ec(double theta)E_coliprotected
ParameterEstimation_E_coli()ParameterEstimation_E_coli
ParameterEstimation_E_coli(const E_coli &modello)ParameterEstimation_E_coli
print_info(std::ofstream &file_save)EO_rExp_tExpvirtual
produce(Funz_C *f_i, double dt)E_colivirtual
production_rateE_coliprotected
Production_rate()E_coli
rand_normal_ec(double stddev)E_coliprotected
RC_0E_coliprotected
RC_1E_coliprotected
RC_qE_coliprotected
reset_barrier()E_colivirtual
reset_barrier_t()E_colivirtual
reset_par()EO_rExp_tExpvirtual
response_function()E_coli
s_F_lambda_r(vector< Q_tau_stat > vector_lambda, int n_vect)ParameterEstimation_E_coli
E_coli::s_F_lambda_r(std::vector< Q_tau_stat > vector_lambda, int n_vect)E_colivirtual
s_lambda_rE_coli
s_lambda_tParameterEstimation_E_coliprotected
salto_E_coliprotected
save_dyn(std::ofstream &file_, double t)EO_rExp_tExp
ParameterEstimation_E_coli::save_dyn(ofstream &file, double t)E_colivirtual
save_E_coli(ofstream *file, double t)E_coli
save_E_coli_initial(std::ofstream *file_, double t)E_coli
save_run(double t, ofstream &file_salto, double dt)E_coli
save_theta(double t, double theta, std::ofstream &file_run)E_coli
save_tumble(double t, ofstream &file_tumble, double dt)E_coli
saveIntDyn(std::string nameFile)EO_rExp_tExpvirtual
seed_ecoliE_coliprotected
set_GoodnessFit(int Good, double D_n, double cumD_n)ParameterEstimation_E_colivirtual
set_response(int ftipo_response_c, double fRC_0, double fRC_1, int fRC_q)E_coli
setEngine_ec(std::mt19937_64 *engine_thread_theta, std::mt19937_64 *engine_thread_bar, std::mt19937_64 *engine_thread_altro)E_coliprotected
setProductionRate(double _prodRate)E_coli
setSeed_ec(unsigned int *seed_thread)E_coliprotected
sign_cE_coliprotected
simulationE_coli
start_simulation(Funz_C *f)E_coli
statF_lambda_r(s_lambda &vector_lambda)E_coli
stationary_dyn(double dt, std::vector< double > &m0, int changed_pos)EO_rExp_tExpvirtual
t_aEO_rExp_tExpprotected
t_eEO_rExp_tExpprotected
t_rE_coliprotected
t_tE_coliprotected
tau_rE_coliprotected
tau_tE_coliprotected
Tau_t(double tt_)E_coli
thetaE_coliprotected
Tipo_batterioE_coli
tipo_lambdaEO_rExp_tExpprotected
tipo_response_cE_coliprotected
tipoNewThetaE_coliprotected
unifRand_ec()E_coliprotected
up_downE_coliprotected
V()E_coliinline
vE_coliprotected
writeScriptgnuplotSingle(std::string tipo, std::string *names_files_Ecoli_mod, std::string *names_files_tau_mod, std::string *names_info_mod, std::string &names_file_dyn_mod, double T_f, int con_gen_sim, int save_)EO_rExp_tExpprotectedvirtual
writeScriptLunchgnuplotSingle(std::string tipo, int save_, int con_gen_sim)E_coliprotectedvirtual
X()E_coli
xE_coliprotected